Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015802224.1_cds_XP_016478467.1_6973
CDS Infomation

[gene=LOC107799835] [db_xref=GeneID:107799835] [protein=rRNA methyltransferase 1, mitochondrial-like] [protein_id=XP_016478467.1] [location=6989..8539] [gbkey=CDS]
Sequence

ATGCTAAAGCAATTTCACACTTCAAAGCCACAGTCTTTACTAGTTGTATGCCATCCAACA
ATTCTAAAGCACCATTTCAAGTTGACATCTTTGAGTATTTCTAATGCCATCTGCAAGAAA
TCCCAAACCCATGATTTGAATCGCTTATTAAGCCCCAGAACTTTGATCCCTCTCAGCACT
AAACCACCTTCTAAAAATTTGAACTTGGATGTATTTTCATGTGGATTTCACCCAAAATAT
CGTCTTCGTAACTACTGTTTAATTACTGCTAGAAGTTATTCAGCTTCGGATTATGGGAAA
ATAGCACAAGGCAGTGAAAAGAATCTTCATTGGCTTGCAAAAGATAAAGCTAAACAAACT
AAGAGAAATGAAAAAGTTGTTATAAGCCGATCTTCGTGGGAGGAGTCGGCTGAGAAGTTC
TTAAAAGATGGTCAGTCTGCTGCGAAAAGTGCAGAATTTAAGAGATATGAGGATAGACGA
GACAATTATCAGGGAAAAACTTATAGTGGTGAAGGAGAAGACGATGAGGGAGATATGGAG
GAAGTTGATGATCCAAGGTGGGATAAGATTAAGAACACGTTCAATCGGATTAAGGTAAGA
CCGGGGTCTGATAGGCCGGAGGTTAGAAGGTGGAACAATCAAGATAGTTGGGGTAAAAAG
ACATGGAAAGAGGCAACTGAATCAACCATACCACGAATGATTGGCGAGGGAATTTATGGG
GTTGGCCCTGTTTTGGCTGCATTGTCTGCGGGAAGAAGGGAATTTTATTCTCTGTATGTA
CAGGAAGGATTGGATTTGAGTGGGAATAACCGGAAAAAGAAGGATAAGAAAGGGTTTGAA
AGAGTTTTGAGGATGGCGGAAAAAGTTGGTTTGAGTAAAAAGGAGGTATCTAAACATGAC
CTCAATATGTTTGCTGATAACAGGCCTCATCAGGGACTGGTCCTCGATGCGTCTCCATTG
GAAATGGTTGGTATTAAGGAGTTGGAACCTGTTTCAACTGAGGAAGAGAGCACTCCTCTT
TGGGTAGCTTTGGATGAGGTTACTGATCCTCAGAATTTGGGGGCAATTATACGGTCTGCT
TACTTTTTTGGAGCTGCAGGGATTGTCTTGTGTGCTAAGAACTCTGCACCGTTGAGTGGG
GTAGTGAGCAAAGCAAGTGCCGGTTCACTTGAATTAGTGGAGTTGAGGTCTTGCAAGAAT
ATGATGCAATTCCTAACGTCTTCAGCAGAAAATGGATGGCGGGTCATAGGTGGATCTGTG
TCTTCAAGAGCTGTTCCATTGCGTGAGATTGTGCCTGGTGCTCCTACAATCCTTGTTTTG
GGAAGTGAGGGCACTGGTCTGAGGCCATTGGTGGAGAGATCTTGTACTCAGTTAGTTAAA
ATTCCAGGAAACATCCCCGTAGATATAATTGTCGGAGAAGACGAAGATGATCATAGTTCA
TCAGGTCAGAACTTTAGGTCCTTCATGGCTGTGGAAAGCTTGAATGTAAGTGTAGCAGCA
GGTGTGCTTCTTCATCACTTGATTGCCAGCAATTGTAGCAAAAACAACTAA

Peptide Sequence

PEP ID

XP_016478467.1
PEP Infomation

PREDICTED: rRNA methyltransferase 1, mitochondrial-like [Nicotiana tabacum]
Sequence

MLKQFHTSKPQSLLVVCHPTILKHHFKLTSLSISNAICKKSQTHDLNRLLSPRTLIPLST
KPPSKNLNLDVFSCGFHPKYRLRNYCLITARSYSASDYGKIAQGSEKNLHWLAKDKAKQT
KRNEKVVISRSSWEESAEKFLKDGQSAAKSAEFKRYEDRRDNYQGKTYSGEGEDDEGDME
EVDDPRWDKIKNTFNRIKVRPGSDRPEVRRWNNQDSWGKKTWKEATESTIPRMIGEGIYG
VGPVLAALSAGRREFYSLYVQEGLDLSGNNRKKKDKKGFERVLRMAEKVGLSKKEVSKHD
LNMFADNRPHQGLVLDASPLEMVGIKELEPVSTEEESTPLWVALDEVTDPQNLGAIIRSA
YFFGAAGIVLCAKNSAPLSGVVSKASAGSLELVELRSCKNMMQFLTSSAENGWRVIGGSV
SSRAVPLREIVPGAPTILVLGSEGTGLRPLVERSCTQLVKIPGNIPVDIIVGEDEDDHSS
SGQNFRSFMAVESLNVSVAAGVLLHHLIASNCSKNN

Transcript Sequence

Gene sequence data has not been registered.